faunus
Faunus::Space Member List

This is the complete list of members for Faunus::Space, including all inherited members.

activeParticles()Faunus::Spaceinline
activeParticles() constFaunus::Spaceinline
addGroup(MoleculeData::index_type molid, const ParticleVector &particles)Faunus::Space
ChangeTrigger typedef (defined in Faunus::Space)Faunus::Space
clear()Faunus::Space
ConstGroupRefVector typedef (defined in Faunus::Space)Faunus::Space
countAtoms(AtomData::index_type atomid) constFaunus::Space
findAtoms(AtomData::index_type atomid)Faunus::Spaceinline
findAtoms(AtomData::index_type atomid) constFaunus::Spaceinline
findGroupContaining(const Particle &particle, bool include_inactive=false)Faunus::Space
findGroupContaining(AtomData::index_type atom_index)Faunus::Space
findMolecules(MoleculeData::index_type molid, Selection selection=Selection::ACTIVE)Faunus::Spaceinline
findMolecules(MoleculeData::index_type molid, Selection selection=Selection::ACTIVE) const (defined in Faunus::Space)Faunus::Spaceinline
geometryFaunus::Space
GeometryType typedef (defined in Faunus::Space)Faunus::Space
getFirstActiveParticleIndex(const GroupType &group) constFaunus::Space
getFirstParticleIndex(const GroupType &group) constFaunus::Space
getGroupFilter(MoleculeData::index_type molid, const Selection &selection)Faunus::Spaceinlinestatic
getGroupIndex(const GroupType &group) constFaunus::Space
getImplicitReservoir() constFaunus::Space
getImplicitReservoir()Faunus::Space
GroupRefVector typedef (defined in Faunus::Space)Faunus::Space
groupsFaunus::Space
GroupType typedefFaunus::Space
GroupVector typedef (defined in Faunus::Space)Faunus::Space
info() (defined in Faunus::Space)Faunus::Space
numMolecules(MoleculeData::index_type molid) constFaunus::Spaceinline
numParticles(Selection selection=Selection::ACTIVE) constFaunus::Space
particlesFaunus::Space
positions() constFaunus::Spaceinline
positions()Faunus::Spaceinline
randomMolecule(MoleculeData::index_type molid, Random &rand, Selection selection=Selection::ACTIVE)Faunus::Space
scaleVolume(double new_volume, Geometry::VolumeMethod method=Geometry::VolumeMethod::ISOTROPIC)Faunus::Space
ScaleVolumeTrigger typedef (defined in Faunus::Space)Faunus::Space
scaleVolumeTriggersFaunus::Space
Selection enum name (defined in Faunus::Space)Faunus::Space
sync(const Space &other, const Change &change)Faunus::Space
SyncTrigger typedef (defined in Faunus::Space)Faunus::Space
toIndices(const RequireParticles auto &particle_range) constFaunus::Spaceinline
updateInternalState(const Change &change)Faunus::Space
updateParticles(const iterator begin, const iterator end, ParticleVector::iterator destination, copy_operation copy_function=[](const Particle &src, Particle &dst) { dst=src;})Faunus::Spaceinline