MetaImagePlugin Class Reference

Inheritance diagram for MetaImagePlugin:

Collaboration diagram for MetaImagePlugin:

Public Member Functions
def	__init__ (self)
def	init (self, plugid, win, mgr)
def	getHelp (self)
def	getObjFiles (self, obj)
def	copyObjFiles (self, obj, sdir, overwrite=False)
def	renameObjFiles (self, obj, oldname, overwrite=False)
def	acceptFile (self, filename)
def	loadImage (self, filename, name=None, kwargs)
def	loadObject (self, filename, name=None, kwargs)
def	saveImage (self, filename, obj, kwargs)
def	saveObject (self, obj, path, overwrite=False, setFilenames=False, kwargs)
def	getScriptCode (self, obj, kwargs)
Public Member Functions inherited from ImageScenePlugin
def	__init__ (self, name)
def	getIcon (self, obj)
def	getObjFiles (self, obj)
def	getReprTypes (self, obj)
def	getReprParams (self, obj, reprtype)
def	createObjPropBox (self, obj)
def	setCTImageRange (self, obj, isCT)
def	getMenu (self, obj)
def	objectMenuItem (self, obj, item)
def	updateObjPropBox (self, obj, prop)
def	updateReprPropBox (self, rep, prop)
def	createReprPropBox (self, rep)
def	applyMaterial (self, rep, mat, kwargs)
def	createRepr (self, obj, reprtype, kwargs)
def	createSceneObject (self, name, images, source=None, isTimeDependent=None)
def	clone (self, obj, name)
def	cropXY (self, obj, name, minx, miny, maxx, maxy)
def	extractTimesteps (self, obj, name, indices=None, timesteps=None, setTimestep=False)
def	createImageStackObject (self, name, width, height, slices, timesteps=1, pos=vec3(), rot=rotator(), spacing=vec3(1))
def	createRespacedObject (self, obj, name, spacing=vec3(1))
def	createIntersectObject (self, name, objs, timesteps=1, spacing=vec3(1))
def	createTestImage (self, w, h, d, timesteps=1, pos=vec3(), rot=rotator(), spacing=vec3(1))
def	createSequence (self, name, objs, timesteps=None)
def	createObjectFromArray (self, name, array, interval=1.0, toffset=0, pos=vec3(), rot=rotator(), spacing=vec3(1), task=None)
def	getImageObjectArray (self, obj, datatype=float)
Public Member Functions inherited from ScenePlugin
def	__init__ (self, name)
def	init (self, plugid, win, mgr)
def	cleanup (self)
def	findObject (self, name, assertFound=True)
def	removeFilesTask (self, fileglob)
def	getScriptCode (self, obj, kwargs)
def	getIcon (self, obj)
def	getMenu (self, obj)
def	getHelp (self)
def	acceptFile (self, filename)
def	loadObject (self, filename, name=None, kwargs)
def	saveObject (self, obj, path, overwrite=False, setFilenames=False, kwargs)
def	checkFileOverwrite (self, obj, dirpath, name=None)
def	getObjFiles (self, obj)
def	renameObjFiles (self, obj, oldname, overwrite=False)
def	copyObjFiles (self, obj, sdir, overwrite=False)
def	removeObject (self, obj)
def	createRepr (self, obj, reprtype, kwargs)
def	getReprParams (self, obj, reprtype)
def	getReprParamHelp (self, obj, reprtype)
def	getReprTypes (self, obj)
def	createHandles (self, rep, kwargs)
def	updateObjPropBox (self, obj, prop)
def	updateReprPropBox (self, rep, prop)
def	createObjPropBox (self, obj)
def	createReprPropBox (self, rep)
def	addSceneObject (self, obj)
def	addSceneObjectRepr (self, rep)
def	applyMaterial (self, rep, mat, kwargs)
def	objectMenuItem (self, obj, item)

Static Public Attributes
tuple	HeaderNames

Private Member Functions
def	_openFileDialog (self)
def	_exportMenuItem (self)

Additional Inherited Members
Public Attributes inherited from ScenePlugin
	plugid
	win
	mgr
	name

Constructor & Destructor Documentation

__init__()

def __init__

(

self

)

Member Function Documentation

_exportMenuItem()

def _exportMenuItem (   self )

private

Here is the call graph for this function:

Here is the caller graph for this function:

_openFileDialog()

def _openFileDialog (   self )

private

Here is the call graph for this function:

Here is the caller graph for this function:

acceptFile()

def acceptFile	(		self,
			filename
	)

Here is the call graph for this function:

copyObjFiles()

def copyObjFiles	(		self,
			obj,
			sdir,
			overwrite = False
	)

Here is the call graph for this function:

getHelp()

def getHelp

(

self

)

getObjFiles()

def getObjFiles	(		self,
			obj
	)

Here is the call graph for this function:

Here is the caller graph for this function:

getScriptCode()

def getScriptCode	(		self,
			obj,
			kwargs
	)

init()

def init	(		self,
			plugid,
			win,
			mgr
	)

Here is the call graph for this function:

loadImage()

def loadImage	(		self,
			filename,
			name = None,
			kwargs
	)

Deprecated, for compatibility only.

Here is the call graph for this function:

Here is the caller graph for this function:

loadObject()

def loadObject	(		self,
			filename,
			name = None,
			kwargs
	)

Loads a MetaImage image object from the header file `filename', which may contain the image data or refer to
a raw file which is then read. If `name' is None then a name for the returned ImageSceneObject is chosen from
`filename', otherwise `name' is used.

Here is the call graph for this function:

Here is the caller graph for this function:

renameObjFiles()

def renameObjFiles	(		self,
			obj,
			oldname,
			overwrite = False
	)

Here is the call graph for this function:

saveImage()

def saveImage	(		self,
			filename,
			obj,
			kwargs
	)

Deprecated, for compatibility only.

Here is the call graph for this function:

Here is the caller graph for this function:

saveObject()

def saveObject	(		self,
			obj,
			path,
			overwrite = False,
			setFilenames = False,
			kwargs
	)

Saves the given ImageSceneObject `obj' to MetaImage file(s) prefixed with `path'. If `path' doesn't
end with .mhd or .mha, then the keyword argument `isOneFile' is used to determine whether to save as one file or
header/raw pair. In this case if `isOneFile' is True then header is stored to `path'+".mhd" and the data
in `path'+".raw". However, if either extension is given in `path', these are used to determine whether
to write to one file or two if `isOneFile' isn't present. If a MetaImage type is supplied in the keyword argument
`datatype' then the image data will be stored in that format, otherwise MET_SHORT is used. Any other keyword
arguments are added to the end of the header, or override those values named in `HeaderNames'.

Here is the call graph for this function:

Here is the caller graph for this function:

Member Data Documentation

HeaderNames

tuple HeaderNames

static

Initial value:

= (
        'ObjectType','NDims','BinaryData','BinaryDataByteOrderMSB','CompressedData','TransformMatrix',
        'Offset','CenterOfRotation','ElementSpacing','DimSize','AnatomicalOrientation','ElementType','ElementDataFile'
    )

---

The documentation for this class was generated from the following file:

• eidolon/plugins/MetaImagePlugin.py